This post arose from a comment attached to the post on Na2He and relating to peculiar and rare topological features of the electron density in molecules called non-nuclear attractors. This set me thinking about other molecules that might exhibit this and one of these is shown below.
Archive for the ‘Interesting chemistry’ Category
The H4 (2+) dication and its bonding.
Wednesday, February 15th, 2017VSEPR Theory: A closer look at bromine trifluoride, BrF3.
Tuesday, February 14th, 2017I analysed the bonding in chlorine trifluoride a few years back in terms of VSEPR theory. I noticed that several searches on this topic which led people to this post also included a query about the differences between it and the bromine analogue. For those who posed this question, here is an equivalent analysis.
Forming a stabilized m-benzyne.
Friday, January 20th, 2017The story so far. Inspired by the report of the most polar neutral compound yet made, I suggested some candidates based on the azulene ring system that if made might be even more polar. This then led to considering a smaller π-analogue of azulene, m-benzyne. Here I ponder how a derivative of this molecule might be made, using computational profiling as one reality check.
Braiding a molecular knot with eight crossings.
Friday, January 20th, 2017This is one of those posts of a molecule whose very structure is interesting enough to merit a picture and a 3D model. The study[cite]10.1126/science.aal1619[/cite] reports a molecular knot with the remarkable number of eight crossings.
Ritonavir: a look at a famous example of conformational polymorphism.
Monday, January 2nd, 2017Here is an inside peek at another one of Derek Lowe’s 250 milestones in chemistry, the polymorphism of Ritonavir.[cite]10.1023/A:1011052932607[/cite] The story in a nutshell concerns one of a pharma company’s worst nightmares; a drug which has been successfully brought to market unexpectedly “changes” after a few years on market to a less effective form (or to use the drug term, formulation). This can happen via a phenomenon known as polymorphism, where the crystalline structure of a molecule can have more than one form.[cite]10.1021/ar00052a005[/cite],[cite]10.1002/anie.201410356[/cite],[cite]10.1039/D1SC06074K[/cite] In this case, form I was formulated into soluble tablets for oral intake. During later manufacturing, a new less-soluble form appeared and “within weeks this new polymorph began to appear throughout both the bulk drug and formulation areas“[cite]10.1023/A:1011052932607[/cite]
The dipole moments of highly polar molecules: glycine zwitterion.
Saturday, December 24th, 2016The previous posts produced discussion about the dipole moments of highly polar molecules. Here to produce some reference points for further discussion I look at the dipole moment of glycine, the classic zwitterion (an internal ion-pair).
Forking “The most polar neutral compound synthesized” into m-benzyne.
Wednesday, December 21st, 2016A project fork is defined (in computing) as creating a distinct and separate strand from an existing (coding) project. Here I apply the principle to the polar azulene 4 explored in an earlier post, taking m-benzyne as a lower homologue of azulene as my starting point.
Molecules of the year? The most polar neutral compound synthesized…
Sunday, December 18th, 2016This, the fourth candidate provided by C&EN for a vote for the molecule of the year as discussed here, lays claim to the World’s most polar neutral molecule (system 1 shown below).[cite]10.1002/anie.201508249[/cite] Here I explore a strategy for extending that record.
